Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GWL_38570D-xylose ABC transporter periplasmic protein. (338 aa)    
Predicted Functional Partners:
xylG
D-xylose ABC transporter ATPase; Part of the ABC transporter complex XylFGH involved in xylose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Xylose importer (TC 3.A.1.2.4) family.
 
 
 0.997
GWL_38590
D-xylose ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.988
GWL_03990
Sugar ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.917
GWL_03980
Sugar ABC transporter ATPase.
 
 
 0.830
rbsA
Sugar ABC transporter ATPase; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 
 0.764
GWL_03960
Sugar ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.756
rbsA-2
Sugar ABC transporter ATPase; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 
 0.756
GWL_03950
Sugar ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.753
GWL_38560
AraC family xylose operon transcription regulator protein.
 
   
 0.681
GWL_31510
Inner-membrane translocator ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
     
  0.640
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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