Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GWL_40450isovaleryl-CoA dehydrogenase. (394 aa)    
Predicted Functional Partners:
GWL_40480
acetyl/propionyl-CoA carboxylase subunit beta.
 
 
 0.993
GWL_40490
acetyl/propionyl-CoA carboxylase subunit alpha.
 
 0.976
GWL_32650
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.959
GWL_05310
3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.958
GWL_09530
Electron transfer flavoprotein subunit alpha.
 0.949
GWL_43980
3-hydroxyacyl-CoA dehydrogenase oxidoreductase.
  
 0.938
GWL_20140
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.907
GWL_22240
acyl-CoA dehydrogenase domain protein.
  
  
 
0.896
GWL_09520
Electron transfer flavoprotein subunit beta.
 
 
 0.876
GWL_24130
enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.848
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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