Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ureAUrease subunit gamma; Belongs to the urease gamma subunit family. (100 aa)    
Predicted Functional Partners:
ureB
Urease subunit beta; Belongs to the urease beta subunit family.
 0.999
ureC
Urease subunit alpha.
 0.999
ureD
Urease accessory UreD protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
 
 
 0.994
ureF
Urease accessory UreF protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
 
 
 0.992
ureE
Urease accessory UreE protein; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family.
 
  
 0.954
ureG
Urease accessory UreG protein; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.
 
  
 0.951
GWL_42310
Arginase/agmatinase/formimionoglutamate hydrolase; Belongs to the arginase family.
    
  0.882
GWL_08260
Amidase family protein.
     
  0.876
GWL_06840
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase.
     
  0.813
GWL_38290
Asp-tRNAAsn/Glu-tRNAGln amidotransferase subunit A.
     
  0.813
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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