Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
GWL_41270Fis family transcriptional regulator. (383 aa)    
Predicted Functional Partners:
GWL_31810
Sigma54-dependent transcription regulator protein.
 
     0.836
GWL_41280
Hypothetical protein.
       0.675
GWL_41260
Flavin-containing monooxygenase-like protein.
 
     0.665
GWL_17440
Putative sensory box sigma-54 dependent transcriptional regulator.
 
   
 0.546
GWL_39920
Two component response regulator protein.
 
      0.534
GWL_19650
Sigma-54 dependent transcription regulator.
 
     0.441
GWL_41290
Hypothetical protein.
       0.436
GWL_41300
Hypothetical protein.
       0.436
GWL_13360
NAD+ dependent acetaldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 
   0.431
GWL_27690
C4-dicarboxylate transport response regulator transcription regulator protein.
 
     0.414
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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