Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GWL_42020Hypothetical protein. (573 aa)    
Predicted Functional Partners:
GWL_42010
VGR-related protein.
 
   
 0.930
GWL_42040
Hypothetical protein.
   
 
 0.881
GWL_42050
Hypothetical protein.
 
   
 0.803
GWL_42030
Hypothetical protein.
       0.773
GWL_34140
Hypothetical protein.
  
     0.755
GWL_34340
Transmembrane protein.
  
     0.741
GWL_19010
Hypothetical protein.
  
   
 0.723
GWL_39280
Hypothetical protein.
  
   
 0.719
GWL_34130
Transmembrane protein.
 
     0.712
GWL_34420
VGR-related protein.
 
   
 0.712
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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