Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GWL_43600Branched-chain amino acid ABC transporter ATPase. (241 aa)    
Predicted Functional Partners:
GWL_43580
Branched-chain amino acid ABC transporter permease.
 
 0.977
GWL_43570
Branched-chain amino acid ABC transporter permease.
 
 
  0.962
GWL_05860
Branched-chain amino acid ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
 0.935
GWL_05850
Branched-chain amino acid ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.919
GWL_11020
Branched-chain aminoacid ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.915
GWL_22750
Amino acid ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
 0.913
GWL_43590
Branched-chain amino acid ABC transporter ATPase.
 
 
 
0.909
GWL_11030
Branched-chain amino acid ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
 0.908
GWL_05370
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.876
GWL_22740
Amino acid ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.875
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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