Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
GWL_44470RpiR family transcriptional regulator. (282 aa)    
Predicted Functional Partners:
GWL_12720
Peptidase T2, asparaginase 2 protein.
  
    0.571
GWL_44050
Hypothetical Protein.
 
  
  0.503
GWL_05040
HAD superfamily haloalkanoic acid dehalogenase.
 
  
  0.490
GWL_44460
Heat-shock Hsp70 protein.
       0.481
GWL_44490
Hypothetical protein.
 
     0.472
GWL_18630
Haloacid dehalogenase-like hydrolase protein.
 
  
  0.455
GWL_09500
2-ketogluconate kinase.
 
  
 0.451
GWL_44450
Short-chain alcohol dehydrogenase.
    
  0.447
GWL_41200
Hypothetical protein.
  
 
 0.416
GWL_04670
2-keto-4-hydroxyglutarate aldolase/-keto-3-deoxy-6-phosphogluconate aldolase.
    
 0.410
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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