Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
GWL_45330Nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein. (321 aa)    
Predicted Functional Partners:
GWL_45350
Nitrate/sulfonate/bicarbonate ABC transporter permease.
 
 0.982
GWL_45360
Nitrate/sulfonate/bicarbonate ABC transporter ATPase.
 
 0.975
GWL_10890
Alkanesulfonates ABC transporter permease.
 
 0.919
GWL_31360
ABC transporter permease protein.
 
  0.883
GWL_09370
Nitrate/sulfonate/bicarbonate ABC transporter permease.
 
 0.875
GWL_08230
Binding-protein-dependent transport systems inner membrane component.
 
 0.865
ssuB
Alkanesulfonates ABC transporter ATPase; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
 
 0.847
GWL_27320
ABC transporter permease.
 
 0.844
GWL_28050
Nitrate/sulfonate/bicarbonate ABC transporter permease.
 
 0.839
GWL_19880
Nitrate/sulfonate/bicarbonate ABC transporter permease.
 
 0.831
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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