Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GWL_45440Bacterioferritin comigratory protein. (197 aa)    
Predicted Functional Partners:
GWL_37360
Methionine synthase I, cobalamin-binding domain-containing protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
 0.754
tmk
Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
   
   0.739
GWL_42270
Threonine dehydratase.
     
  0.708
GWL_36940
Peroxiredoxin protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
 
 
 0.689
GWL_15190
Homoserine dehydrogenase.
  
 
  0.663
GWL_14620
Flagellar basal-body rod protein; Belongs to the flagella basal body rod proteins family.
    
   0.611
GWL_45450
Sugar kinase ribokinase family protein.
       0.586
GWL_02700
Thioredoxin 1; Belongs to the thioredoxin family.
   
 
 0.565
GWL_19120
Hypothetical protein.
   
 
 0.551
GWL_43210
Antioxidant oxidoreductase.
  
 
 0.545
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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