Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GWL_45980Fructokinase. (301 aa)    
Predicted Functional Partners:
GWL_46060
D-arabinitol 4-dehydrogenase.
 
  
 0.947
GWL_14310
GDP-mannose pyrophosphorylase; Belongs to the mannose-6-phosphate isomerase type 2 family.
    
 0.908
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.901
GWL_42690
PTS system mannose/fructose-specific transporter subunit IIA.
    
 0.886
glmS
L-glutamine:D-fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
     
 0.885
fbp
Fructose-1,6-bisphosphatase; Belongs to the FBPase class 1 family.
     
 0.880
pgi-2
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.852
GWL_05620
Superoxide dismutase [Fe] protein; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
    
 0.851
GWL_11820
Sugar kinase,ribokinase family protein.
  
  
0.832
edd
6-phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family.
 
  
 0.801
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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