Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
GWL_46060D-arabinitol 4-dehydrogenase. (477 aa)    
Predicted Functional Partners:
xylB-2
Sugar (pentulose and hexulose) kinase.
 
  
 0.989
xylB
D-xylulose kinase.
 
  
 0.976
GWL_45980
Fructokinase.
 
  
 0.947
GWL_14310
GDP-mannose pyrophosphorylase; Belongs to the mannose-6-phosphate isomerase type 2 family.
    
 0.929
GWL_28150
D-xylulose reductase.
    
 0.898
GWL_46040
Phosphatase/phosphohexomutase.
   
 0.875
GWL_32590
Altronate hydrolase.
 
 
 0.844
GWL_24940
D-galactarate dehydratase.
 
 
 0.826
GWL_46030
Sugar ABC transporter permease.
 
  
 0.825
GWL_11820
Sugar kinase,ribokinase family protein.
    
 0.804
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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