Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GWL_46180Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 protein. (343 aa)    
Predicted Functional Partners:
GWL_04810
Sulfite reductase, flavoprotein component.
  
 0.946
GWL_30180
CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase.
 
 
 0.930
GWL_35450
Phenylacetic acid degradation protein.
  
 
 0.919
GWL_24870
FeS cluster assembly scaffold protein; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters.
  
 0.911
GWL_18790
Cytochrome P450 monooxygenase.
 0.899
GWL_33020
Glutamate synthase small subunit oxidoreductase.
   
 0.896
GWL_35400
Ring-opening enzyme protein.
  
 
 0.874
GWL_35440
Phenylacetic acid degradation protein.
  
 0.872
GWL_35460
Phenylacetic acid degradation protein; Overlaps another CDS with the same product name.
  
 0.872
GWL_35470
Phenylacetic acid degradation protein; Overlaps another CDS with the same product name.
  
 
 0.865
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
Server load: low (20%) [HD]