STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS97151.1Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (557 aa)    
Predicted Functional Partners:
SFS97138.1
Peptide/nickel transport system permease protein.
 
 0.986
SFS97126.1
Peptide/nickel transport system permease protein.
 
 
 0.964
SFT18679.1
Peptide/nickel transport system permease protein.
 
 
 0.936
SFT15610.1
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the binding-protein-dependent transport system permease family.
 
 
0.932
SFS79590.1
Peptide/nickel transport system permease protein.
 
 0.930
SFS40625.1
Peptide/nickel transport system permease protein.
 
 
 0.924
SFT03697.1
Peptide/nickel transport system permease protein.
 
 0.917
SFT14013.1
Peptide/nickel transport system permease protein.
 
 0.916
SFT20743.1
Peptide/nickel transport system permease protein.
 
 0.897
SFS97167.1
Peptide/nickel transport system substrate-binding protein.
 
 
 0.893
Your Current Organism:
Streptomyces harbinensis
NCBI taxonomy Id: 1176198
Other names: CGMCC 4.7047, DSM 42076, S. harbinensis, Streptomyces harbinensis Liu et al. 2013, Streptomyces sp. NEAU-Da3, Streptomyces sp. VJPR 1, strain NEAU-Da3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.