STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT17678.1Thiamine transport system substrate-binding protein. (362 aa)    
Predicted Functional Partners:
SFT17687.1
Thiamine transport system permease protein.
 
 
 0.997
fbpC
Thiamine transport system ATP-binding protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.
 
  
  0.988
SFS54755.1
iron(III) transport system permease protein.
 
 
 0.839
rlmN
23S rRNA (adenine2503-C2)-methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.
       0.722
SFT17657.1
Phosphatidate cytidylyltransferase; Belongs to the CDS family.
       0.699
SFS34324.1
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
    
  0.661
SFT05140.1
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
    
  0.661
frr
Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.
       0.661
pyrH
Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP.
       0.646
SFS42761.1
NitT/TauT family transport system ATP-binding protein.
    
  0.636
Your Current Organism:
Streptomyces harbinensis
NCBI taxonomy Id: 1176198
Other names: CGMCC 4.7047, DSM 42076, S. harbinensis, Streptomyces harbinensis Liu et al. 2013, Streptomyces sp. NEAU-Da3, Streptomyces sp. VJPR 1, strain NEAU-Da3
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.