STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Y5S_02053Hypothetical protein. (916 aa)    
Predicted Functional Partners:
Y5S_02052
Hypothetical protein; COG0668 Small-conductance mechanosensitive channel.
 
     0.951
Y5S_01322
Hypothetical protein.
  
     0.767
Y5S_01182
Hypothetical protein; COG0457 FOG: TPR repeat.
  
     0.744
Y5S_02689
COG1462 Uncharacterized protein involved in formation of curli polymers.
  
     0.718
Y5S_03033
Alginate biosynthesis regulator; COG0790 FOG: TPR repeat, SEL1 subfamily.
  
     0.718
Y5S_01470
COG1309 Transcriptional regulator.
  
     0.717
Y5S_01957
Hypothetical protein.
  
     0.710
Y5S_00645
Hypothetical protein.
  
     0.707
Y5S_03580
Hypothetical protein; COG0457 FOG: TPR repeat.
  
     0.701
Y5S_03170
Hypothetical protein; COG3720 Putative heme degradation protein.
  
     0.698
Your Current Organism:
Alcanivorax nanhaiticus
NCBI taxonomy Id: 1177154
Other names: A. nanhaiticus, Alcanivorax nanhaiticus Lai et al. 2016, Alcanivorax sp. 19-m-6, KCTC 52137, MCCC 1A05629, strain 19-m-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.