STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKF73287.1Hypothetical protein. (112 aa)    
Predicted Functional Partners:
EKF73590.1
General secretion pathway protein GspJ; COG4795 Type II secretory pathway, component PulJ.
   
 0.829
EKF73589.1
General secretion pathway protein GspK; COG3156 Type II secretory pathway, component PulK.
   
 
 0.767
EKF75904.1
Hypothetical protein.
  
     0.674
cysC
Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate.
       0.540
EKF75224.1
DNA internalization-like protein; COG0658 Predicted membrane metal-binding protein.
   
  
 0.528
EKF74249.1
Type IV pilus assembly protein TapC; COG1459 Type II secretory pathway, component PulF.
   
  
 0.521
EKF73594.1
General secretion pathway protein F; COG1459 Type II secretory pathway, component PulF.
   
  
 0.521
EKF75442.1
Type II secretion system protein; COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB.
   
 0.514
EKF74248.1
Type IV fimbrial assembly protein PilB; COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB.
   
 0.514
EKF73595.1
General secretion pathway protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
   
 0.514
Your Current Organism:
Alcanivorax hongdengensis
NCBI taxonomy Id: 1177179
Other names: A. hongdengensis A-11-3, Alcanivorax hongdengensis A-11-3, Alcanivorax hongdengensis str. A-11-3, Alcanivorax hongdengensis strain A-11-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.