STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKF72749.1COG0582 Integrase. (169 aa)    
Predicted Functional Partners:
EKF73579.1
COG0582 Integrase; Belongs to the 'phage' integrase family.
 
     0.919
EKF74663.1
Phage integrase family protein; COG0582 Integrase; Belongs to the 'phage' integrase family.
  
     0.703
EKF74027.1
DNA-binding protein; COG3311 Predicted transcriptional regulator.
  
  
 0.540
Your Current Organism:
Alcanivorax hongdengensis
NCBI taxonomy Id: 1177179
Other names: A. hongdengensis A-11-3, Alcanivorax hongdengensis A-11-3, Alcanivorax hongdengensis str. A-11-3, Alcanivorax hongdengensis strain A-11-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.