STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHH79_07395Unannotated protein; Belongs to the LysR transcriptional regulatory family. (293 aa)    
Predicted Functional Partners:
CHH79_07400
Unannotated protein.
 
     0.676
CHH79_07405
Unannotated protein.
  
    0.545
CHH79_13070
Unannotated protein.
  
  
 0.486
Your Current Organism:
Bacillus siamensis
NCBI taxonomy Id: 1177185
Other names: B. siamensis KCTC 13613, Bacillus siamensis DSM 25261, Bacillus siamensis KCTC 13613, Bacillus siamensis PD-A10, Bacillus siamensis str. KCTC 13613, Bacillus siamensis strain KCTC 13613, Bacillus sp. PD-A10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.