STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDK01673.1Polar amino acid ABC transporter, inner membrane subunit. (281 aa)    
Predicted Functional Partners:
yecC
Putative transporter subunit: ATP-binding component of ABC superfamily transporter; Evidence 3:Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt:putative transporter.
 0.999
CDK01674.1
ABC-type transporter, periplasmic subunit family 3.
 
 0.996
gluB
Glutamate-binding protein; Belongs to the bacterial solute-binding protein 3 family.
 
 0.828
aapP
Amino-acid transporter subunit; Evidence 2b:Function of strongly homologous gene; Product type t:transporter.
 
  0.804
CDK00401.1
Glutamate permease.
 
  
 
0.550
gluC
Glutamate transport system permease protein GluC.
  
  
 
0.500
CDJ99655.1
ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
  
 0.473
CDJ98889.1
ABC-2 type transporter.
    
  0.428
CDK01559.1
ABC-type polysaccharide/polyol phosphate export systems, permease component.
    
  0.428
CDK01870.1
Putative ABC-2 type transporter; Evidence 3:Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
    
  0.428
Your Current Organism:
Microbacterium sp. C448
NCBI taxonomy Id: 1177594
Other names: M. sp. C448
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