Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ODA65897.1 | ODA65909.1 | A7A08_03221 | A7A08_03202 | Anthranilate 1,2-dioxygenase large subunit. | Ferredoxin--NAD(P)(+) reductase CarAd. | 0.961 |
ODA65897.1 | ODA66170.1 | A7A08_03221 | A7A08_03023 | Anthranilate 1,2-dioxygenase large subunit. | Assimilatory nitrite reductase [NAD(P)H] small subunit. | 0.685 |
ODA65897.1 | ODA67378.1 | A7A08_03221 | A7A08_01410 | Anthranilate 1,2-dioxygenase large subunit. | Putative fatty-acid--CoA ligase fadD21. | 0.648 |
ODA65897.1 | ODA68201.1 | A7A08_03221 | A7A08_00018 | Anthranilate 1,2-dioxygenase large subunit. | 3-hydroxybenzoate 6-hydroxylase 1. | 0.647 |
ODA65897.1 | acsA | A7A08_03221 | A7A08_01110 | Anthranilate 1,2-dioxygenase large subunit. | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.627 |
ODA65909.1 | ODA65897.1 | A7A08_03202 | A7A08_03221 | Ferredoxin--NAD(P)(+) reductase CarAd. | Anthranilate 1,2-dioxygenase large subunit. | 0.961 |
ODA65909.1 | ODA66170.1 | A7A08_03202 | A7A08_03023 | Ferredoxin--NAD(P)(+) reductase CarAd. | Assimilatory nitrite reductase [NAD(P)H] small subunit. | 0.821 |
ODA65909.1 | ODA66703.1 | A7A08_03202 | A7A08_02471 | Ferredoxin--NAD(P)(+) reductase CarAd. | Carboxylesterase NlhH. | 0.758 |
ODA65909.1 | ODA67378.1 | A7A08_03202 | A7A08_01410 | Ferredoxin--NAD(P)(+) reductase CarAd. | Putative fatty-acid--CoA ligase fadD21. | 0.886 |
ODA65909.1 | ODA68201.1 | A7A08_03202 | A7A08_00018 | Ferredoxin--NAD(P)(+) reductase CarAd. | 3-hydroxybenzoate 6-hydroxylase 1. | 0.756 |
ODA65909.1 | acsA | A7A08_03202 | A7A08_01110 | Ferredoxin--NAD(P)(+) reductase CarAd. | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.747 |
ODA66170.1 | ODA65897.1 | A7A08_03023 | A7A08_03221 | Assimilatory nitrite reductase [NAD(P)H] small subunit. | Anthranilate 1,2-dioxygenase large subunit. | 0.685 |
ODA66170.1 | ODA65909.1 | A7A08_03023 | A7A08_03202 | Assimilatory nitrite reductase [NAD(P)H] small subunit. | Ferredoxin--NAD(P)(+) reductase CarAd. | 0.821 |
ODA66170.1 | ODA68201.1 | A7A08_03023 | A7A08_00018 | Assimilatory nitrite reductase [NAD(P)H] small subunit. | 3-hydroxybenzoate 6-hydroxylase 1. | 0.626 |
ODA66703.1 | ODA65909.1 | A7A08_02471 | A7A08_03202 | Carboxylesterase NlhH. | Ferredoxin--NAD(P)(+) reductase CarAd. | 0.758 |
ODA66703.1 | ODA67378.1 | A7A08_02471 | A7A08_01410 | Carboxylesterase NlhH. | Putative fatty-acid--CoA ligase fadD21. | 0.998 |
ODA66703.1 | ODA68201.1 | A7A08_02471 | A7A08_00018 | Carboxylesterase NlhH. | 3-hydroxybenzoate 6-hydroxylase 1. | 0.637 |
ODA67378.1 | ODA65897.1 | A7A08_01410 | A7A08_03221 | Putative fatty-acid--CoA ligase fadD21. | Anthranilate 1,2-dioxygenase large subunit. | 0.648 |
ODA67378.1 | ODA65909.1 | A7A08_01410 | A7A08_03202 | Putative fatty-acid--CoA ligase fadD21. | Ferredoxin--NAD(P)(+) reductase CarAd. | 0.886 |
ODA67378.1 | ODA66703.1 | A7A08_01410 | A7A08_02471 | Putative fatty-acid--CoA ligase fadD21. | Carboxylesterase NlhH. | 0.998 |
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