STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ODA68706.1PRC-barrel domain protein. (171 aa)    
Predicted Functional Partners:
ODA68772.1
Putative transcriptional regulatory protein pdtaR.
  
    0.696
ODA68253.1
PRC-barrel domain protein.
  
     0.692
ODA68707.1
Ferrous-iron efflux pump FieF; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
       0.565
ODA68774.1
ECF RNA polymerase sigma factor SigH; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.551
ODA68769.1
Blue-light-activated histidine kinase 1.
  
    0.483
ODA67194.1
Blue-light-activated histidine kinase.
  
     0.454
ODA67435.1
Putative transcriptional regulatory protein pdtaR.
  
    0.444
ODA67707.1
Outer membrane porin F precursor.
  
     0.441
ODA68765.1
Hypothetical protein.
  
     0.423
Your Current Organism:
Methyloligella halotolerans
NCBI taxonomy Id: 1177755
Other names: CCUG 61687, DSM 25045, M. halotolerans, Methyloligella halotolerans Doronina et al. 2014, Rhizobiales bacterium C2, VKM B-2706, strain C2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.