STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ODA68842.1Hypothetical protein. (157 aa)    
Predicted Functional Partners:
ODA68843.1
NADH dehydrogenase.
 
     0.791
ODA66072.1
Chaperone protein DnaJ.
  
     0.628
ODA67932.1
HemY protein N-terminus.
  
     0.590
ODA68844.1
Vitamin B12-dependent ribonucleotide reductase; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.
 
     0.582
ODA68219.1
Hypothetical protein.
  
     0.561
ODA66473.1
Hypothetical protein.
  
     0.557
ODA66937.1
Hypothetical protein.
  
     0.528
ODA68915.1
Apolipoprotein A1/A4/E domain protein.
  
     0.523
ODA66264.1
Cell division protein FtsX.
  
     0.509
atpF-2
ATP synthase subunit b 2; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
  
     0.501
Your Current Organism:
Methyloligella halotolerans
NCBI taxonomy Id: 1177755
Other names: CCUG 61687, DSM 25045, M. halotolerans, Methyloligella halotolerans Doronina et al. 2014, Rhizobiales bacterium C2, VKM B-2706, strain C2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.