STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ODA68984.1Modulator of FtsH protease HflC. (389 aa)    
Predicted Functional Partners:
ODA68985.1
Modulator of FtsH protease HflK; HflC and HflK could encode or regulate a protease.
 
0.999
ftsH
ATP-dependent zinc metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
  
 0.997
ODA68210.1
Rhomboid family protein.
   
 0.811
ODA66118.1
Rhomboid protease GluP.
   
 0.811
ODA68983.1
Hypothetical protein.
       0.800
ODA68932.1
Phosphoribulokinase.
    
  0.743
ODA67191.1
Vitamin B12 transport ATP-binding protein BacA.
    
  0.696
ODA67207.1
PqqF; Belongs to the peptidase M16 family.
   
 0.687
ODA67208.1
Peptidase M16.
   
 0.687
ODA67237.1
PqqF; Belongs to the peptidase M16 family.
   
 0.687
Your Current Organism:
Methyloligella halotolerans
NCBI taxonomy Id: 1177755
Other names: CCUG 61687, DSM 25045, M. halotolerans, Methyloligella halotolerans Doronina et al. 2014, Rhizobiales bacterium C2, VKM B-2706, strain C2
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