Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ODA66723.1 | ahcY | A7A08_02491 | A7A08_00937 | Trans-aconitate 2-methyltransferase. | Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. | 0.714 |
| ODA66723.1 | nuoI | A7A08_02491 | A7A08_00335 | Trans-aconitate 2-methyltransferase. | NADH-quinone oxidoreductase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. | 0.894 |
| ODA68529.1 | ODA68531.1 | A7A08_00355 | A7A08_00357 | Cysteine synthase. | Cystathionine beta-lyase MetC. | 0.977 |
| ODA68529.1 | ODA68553.1 | A7A08_00355 | A7A08_00382 | Cysteine synthase. | Methionine gamma-lyase. | 0.739 |
| ODA68529.1 | ODA68953.1 | A7A08_00355 | A7A08_00787 | Cysteine synthase. | Hypothetical protein. | 0.770 |
| ODA68529.1 | ODA69046.1 | A7A08_00355 | A7A08_00882 | Cysteine synthase. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.658 |
| ODA68529.1 | ODA69049.1 | A7A08_00355 | A7A08_00885 | Cysteine synthase. | 5,10-methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | 0.721 |
| ODA68529.1 | ahcY | A7A08_00355 | A7A08_00937 | Cysteine synthase. | Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. | 0.760 |
| ODA68529.1 | nuoI | A7A08_00355 | A7A08_00335 | Cysteine synthase. | NADH-quinone oxidoreductase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. | 0.619 |
| ODA68531.1 | ODA68529.1 | A7A08_00357 | A7A08_00355 | Cystathionine beta-lyase MetC. | Cysteine synthase. | 0.977 |
| ODA68531.1 | ODA68553.1 | A7A08_00357 | A7A08_00382 | Cystathionine beta-lyase MetC. | Methionine gamma-lyase. | 0.749 |
| ODA68531.1 | ODA68953.1 | A7A08_00357 | A7A08_00787 | Cystathionine beta-lyase MetC. | Hypothetical protein. | 0.548 |
| ODA68531.1 | ODA69046.1 | A7A08_00357 | A7A08_00882 | Cystathionine beta-lyase MetC. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.681 |
| ODA68531.1 | ODA69049.1 | A7A08_00357 | A7A08_00885 | Cystathionine beta-lyase MetC. | 5,10-methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | 0.853 |
| ODA68531.1 | ahcY | A7A08_00357 | A7A08_00937 | Cystathionine beta-lyase MetC. | Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. | 0.670 |
| ODA68531.1 | metK | A7A08_00357 | A7A08_02765 | Cystathionine beta-lyase MetC. | S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | 0.551 |
| ODA68531.1 | nuoI | A7A08_00357 | A7A08_00335 | Cystathionine beta-lyase MetC. | NADH-quinone oxidoreductase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. | 0.421 |
| ODA68553.1 | ODA68529.1 | A7A08_00382 | A7A08_00355 | Methionine gamma-lyase. | Cysteine synthase. | 0.739 |
| ODA68553.1 | ODA68531.1 | A7A08_00382 | A7A08_00357 | Methionine gamma-lyase. | Cystathionine beta-lyase MetC. | 0.749 |
| ODA68553.1 | ODA68953.1 | A7A08_00382 | A7A08_00787 | Methionine gamma-lyase. | Hypothetical protein. | 0.626 |
page 1 of 4