STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ODA67967.1Gamma-aminobutyraldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (483 aa)    
Predicted Functional Partners:
fmt
Methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
 
      0.900
ODA67968.1
Inner membrane ABC transporter permease protein YdcV.
  
 0.891
ODA67378.1
Putative fatty-acid--CoA ligase fadD21.
  
 0.876
ODA67969.1
Inner membrane ABC transporter permease protein YdcU.
 
     0.868
ODA67374.1
Acyl-CoA dehydrogenase.
  
 0.840
ODA67971.1
Putrescine-binding periplasmic protein precursor.
 
    0.824
ODA68351.1
Bifunctional protein PutA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family.
 
0.786
ODA67970.1
Spermidine/putrescine import ATP-binding protein PotA; Belongs to the ABC transporter superfamily.
    0.783
ODA67486.1
Ferredoxin-dependent glutamate synthase 1.
  
 
 0.759
ODA67487.1
Ferredoxin-dependent glutamate synthase 1.
  
 
 0.759
Your Current Organism:
Methyloligella halotolerans
NCBI taxonomy Id: 1177755
Other names: CCUG 61687, DSM 25045, M. halotolerans, Methyloligella halotolerans Doronina et al. 2014, Rhizobiales bacterium C2, VKM B-2706, strain C2
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