STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ODA67371.1HTH-type transcriptional regulator AppY. (338 aa)    
Predicted Functional Partners:
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.591
ODA67378.1
Putative fatty-acid--CoA ligase fadD21.
  
  
 0.495
ODA66056.1
Transcriptional regulator EutR.
  
     0.433
ODA66505.1
HTH-type transcriptional regulator CdhR.
  
   0.425
ODA67943.1
Globin; Belongs to the globin family.
  
 
 0.422
ODA67370.1
Cytochrome P450-pinF1, plant-inducible.
       0.412
ODA68898.1
Blue-light-activated protein.
   
 
 0.411
Your Current Organism:
Methyloligella halotolerans
NCBI taxonomy Id: 1177755
Other names: CCUG 61687, DSM 25045, M. halotolerans, Methyloligella halotolerans Doronina et al. 2014, Rhizobiales bacterium C2, VKM B-2706, strain C2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.