STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ODA67147.1Virulence sensor histidine kinase PhoQ. (489 aa)    
Predicted Functional Partners:
ODA68452.1
2-oxoisovalerate dehydrogenase subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
    
 0.991
ODA67146.1
Transcriptional regulatory protein QseB.
 
  0.966
ODA67713.1
Chemotaxis protein CheA.
  
 0.957
ODA67714.1
Gliding motility regulatory protein.
  
 0.957
ODA67145.1
Peptidase propeptide and YPEB domain protein.
 
  
 0.954
ODA67906.1
Signal transduction histidine-protein kinase BarA.
  
  0.920
ODA68249.1
Sensory/regulatory protein RpfC.
   
 0.857
ODA66829.1
Transcriptional regulatory protein PhoP.
  
  0.835
ODA65955.1
Blue-light-activated histidine kinase.
  
 0.791
ODA66693.1
Bacteriophytochrome.
   
 0.739
Your Current Organism:
Methyloligella halotolerans
NCBI taxonomy Id: 1177755
Other names: CCUG 61687, DSM 25045, M. halotolerans, Methyloligella halotolerans Doronina et al. 2014, Rhizobiales bacterium C2, VKM B-2706, strain C2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.