STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ODA66887.1Methylmalonyl-CoA mutase large subunit. (719 aa)    
Predicted Functional Partners:
ODA66886.1
Methylmalonyl-CoA mutase small subunit.
 
0.999
ODA66888.1
Putative GTPase.
  
 0.999
ODA66108.1
Methylmalonyl-CoA mutase large subunit.
 
0.999
ODA68503.1
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein.
 
  
 0.961
ODA67374.1
Acyl-CoA dehydrogenase.
  
 
 0.866
ODA68343.1
Acetyl-/propionyl-coenzyme A carboxylase alpha chain.
  
 
 0.837
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
    
 0.799
ODA68171.1
Succinate dehydrogenase iron-sulfur subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
   
 
 0.796
ODA68482.1
Citrate synthase; Belongs to the citrate synthase family.
     
 0.790
ODA67378.1
Putative fatty-acid--CoA ligase fadD21.
    
 0.773
Your Current Organism:
Methyloligella halotolerans
NCBI taxonomy Id: 1177755
Other names: CCUG 61687, DSM 25045, M. halotolerans, Methyloligella halotolerans Doronina et al. 2014, Rhizobiales bacterium C2, VKM B-2706, strain C2
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