STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ODA67018.1Sulfur oxidation protein SoxY. (278 aa)    
Predicted Functional Partners:
ODA67017.1
Hydroxyacylglutathione hydrolase.
 
     0.918
ODA66651.1
mxaJ protein.
  
  
  0.917
ODA68232.1
Bacterial extracellular solute-binding protein, family 3.
 
  
  0.820
ODA66122.1
Bacterial extracellular solute-binding protein, family 3.
 
  
  0.817
ODA67033.1
Cytochrome c.
 
  
 0.816
ODA66668.1
mxaJ protein.
 
  
  0.816
ODA66669.1
mxaF protein, large subunit of methanol dehydrogenase [cytochrome c].
 
  
  0.811
ODA66652.1
Methanol dehydrogenase large subunit protein; Putative dehydrogenase XoxF.
 
  
  0.773
ODA66659.1
mxaD protein.
  
     0.765
ODA66769.1
Methanol dehydrogenase large subunit protein.
 
  
  0.758
Your Current Organism:
Methyloligella halotolerans
NCBI taxonomy Id: 1177755
Other names: CCUG 61687, DSM 25045, M. halotolerans, Methyloligella halotolerans Doronina et al. 2014, Rhizobiales bacterium C2, VKM B-2706, strain C2
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