STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ODA66713.1Type I secretion system membrane fusion protein PrsE. (436 aa)    
Predicted Functional Partners:
ODA66712.1
Type I secretion system ATP-binding protein PrsD.
  
 0.956
ODA66714.1
Serralysin precursor.
 
  
 0.857
ODA65932.1
Type I secretion system ATP-binding protein PrsD.
  
 0.836
ODA68763.1
Outer membrane efflux protein BepC precursor.
  
 0.794
ODA68652.1
Serralysin A precursor.
 
  
 0.775
ODA65931.1
Hemolysin, plasmid.
 
  
 0.767
ODA65933.1
Hemolysin, chromosomal.
 
  
 0.753
ODA67211.1
Hypothetical protein.
  
 0.640
ODA66602.1
Macrolide export ATP-binding/permease protein MacB.
  
  
 0.505
ODA67228.1
Cytochrome c oxidase subunit 2 precursor; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
      0.413
Your Current Organism:
Methyloligella halotolerans
NCBI taxonomy Id: 1177755
Other names: CCUG 61687, DSM 25045, M. halotolerans, Methyloligella halotolerans Doronina et al. 2014, Rhizobiales bacterium C2, VKM B-2706, strain C2
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.