STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ODA66487.1Cyclic di-GMP phosphodiesterase Gmr. (717 aa)    
Predicted Functional Partners:
ODA68249.1
Sensory/regulatory protein RpfC.
 0.999
ODA67906.1
Signal transduction histidine-protein kinase BarA.
 0.999
ODA67186.1
Blue-light-activated protein.
 
0.999
ODA66106.1
Autoinducer 2 sensor kinase/phosphatase LuxQ.
 0.995
ODA68898.1
Blue-light-activated protein.
 
 0.990
ODA67014.1
Oxygen sensor protein DosP.
 
0.989
ODA67175.1
Cell-division control histidine kinase PdhS.
 0.988
ODA66866.1
Histidine protein kinase DivJ.
 0.979
ODA68066.1
Cyclic di-GMP phosphodiesterase Gmr.
 
 
0.969
ODA67194.1
Blue-light-activated histidine kinase.
  
 0.969
Your Current Organism:
Methyloligella halotolerans
NCBI taxonomy Id: 1177755
Other names: CCUG 61687, DSM 25045, M. halotolerans, Methyloligella halotolerans Doronina et al. 2014, Rhizobiales bacterium C2, VKM B-2706, strain C2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.