STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ODA66209.1Putative intracellular septation protein A; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family. (218 aa)    
Predicted Functional Partners:
ftsY
Signal recognition particle receptor FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components.
       0.800
ODA66206.1
Threonylcarbamoyladenosine tRNA methylthiotransferase MtaB.
       0.643
ODA67244.1
Homoserine kinase.
  
     0.603
ODA66207.1
Hypothetical protein.
       0.594
ODA66205.1
Diaminopimelate epimerase; Belongs to the diaminopimelate epimerase family.
       0.554
ODA67722.1
Hypothetical protein.
  
     0.528
ODA66218.1
Hypothetical protein.
 
     0.478
ODA65969.1
Phosphoglycolate phosphatase.
 
     0.474
ODA68076.1
Hypothetical protein.
 
     0.447
ODA67218.1
Hypothetical protein.
  
     0.435
Your Current Organism:
Methyloligella halotolerans
NCBI taxonomy Id: 1177755
Other names: CCUG 61687, DSM 25045, M. halotolerans, Methyloligella halotolerans Doronina et al. 2014, Rhizobiales bacterium C2, VKM B-2706, strain C2
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