STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ODA66233.1Nickel/cobalt efflux protein RcnA; Belongs to the NiCoT transporter (TC 2.A.52) family. (367 aa)    
Predicted Functional Partners:
ODA66234.1
Hypothetical protein.
     0.995
ODA66235.1
Zinc uptake regulation protein; Belongs to the Fur family.
       0.567
ODA66116.1
Hypoxia induced protein conserved region.
  
     0.550
ODA68586.1
RDD family protein.
  
     0.544
ODA66238.1
Manganese transport system membrane protein MntB.
 
     0.539
ODA68900.1
Flagellar biosynthesis protein, FliO.
  
     0.502
ODA68207.1
Hypothetical protein.
  
     0.500
ODA67227.1
Invasion associated locus B (IalB) protein.
  
     0.493
ODA66237.1
High-affinity zinc uptake system ATP-binding protein ZnuC.
       0.476
ODA67720.1
Hypothetical protein.
  
     0.469
Your Current Organism:
Methyloligella halotolerans
NCBI taxonomy Id: 1177755
Other names: CCUG 61687, DSM 25045, M. halotolerans, Methyloligella halotolerans Doronina et al. 2014, Rhizobiales bacterium C2, VKM B-2706, strain C2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.