STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ODA65918.1Amidophosphoribosyltransferase precursor. (314 aa)    
Predicted Functional Partners:
ODA65919.1
GXGXG motif protein.
 
  0.988
ODA67485.1
Glutamate synthase [NADPH] small chain.
  
 0.986
ODA67486.1
Ferredoxin-dependent glutamate synthase 1.
  
  0.979
ODA67487.1
Ferredoxin-dependent glutamate synthase 1.
  
  0.979
ODA65920.1
Glutamate synthase [NADPH] large chain; Belongs to the glutamate synthase family.
 
  0.977
ODA66676.1
GXGXG motif protein.
 
  0.949
ODA66675.1
Glutamate synthase; Belongs to the glutamate synthase family.
 
  0.923
ODA68863.1
Iron-binding zinc finger CDGSH type.
  
  0.778
ODA67742.1
4-methylaminobutanoate oxidase (formaldehyde-forming).
 
  
  0.764
ODA67747.1
Aminomethyltransferase.
 
  
 0.756
Your Current Organism:
Methyloligella halotolerans
NCBI taxonomy Id: 1177755
Other names: CCUG 61687, DSM 25045, M. halotolerans, Methyloligella halotolerans Doronina et al. 2014, Rhizobiales bacterium C2, VKM B-2706, strain C2
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