Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EJF06068.1 | EJF06355.1 | ThvES_00018710 | ThvES_00015660 | DNA polymerase III, alpha subunit (gram-positive type); PFAM: Exonuclease; IMG reference gene:2508611143_SP. | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. | 0.542 |
| EJF06068.1 | EJF06637.1 | ThvES_00018710 | ThvES_00012720 | DNA polymerase III, alpha subunit (gram-positive type); PFAM: Exonuclease; IMG reference gene:2508611143_SP. | PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb). | 0.490 |
| EJF06068.1 | EJF07172.1 | ThvES_00018710 | ThvES_00007330 | DNA polymerase III, alpha subunit (gram-positive type); PFAM: Exonuclease; IMG reference gene:2508611143_SP. | PFAM: DNA polymerase III, delta subunit. | 0.934 |
| EJF06068.1 | EJF07244.1 | ThvES_00018710 | ThvES_00006340 | DNA polymerase III, alpha subunit (gram-positive type); PFAM: Exonuclease; IMG reference gene:2508611143_SP. | PFAM: DNA polymerase III beta subunit, C-terminal domain; DNA polymerase III beta subunit, N-terminal domain; DNA polymerase III beta subunit, central domain; TIGRFAM: DNA polymerase III, beta subunit. | 0.922 |
| EJF06068.1 | EJF07377.1 | ThvES_00018710 | ThvES_00005510 | DNA polymerase III, alpha subunit (gram-positive type); PFAM: Exonuclease; IMG reference gene:2508611143_SP. | PFAM: Exonuclease; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family. | 0.934 |
| EJF06068.1 | EJF07609.1 | ThvES_00018710 | ThvES_00003210 | DNA polymerase III, alpha subunit (gram-positive type); PFAM: Exonuclease; IMG reference gene:2508611143_SP. | Hypothetical protein. | 0.867 |
| EJF06068.1 | EJF07610.1 | ThvES_00018710 | ThvES_00003220 | DNA polymerase III, alpha subunit (gram-positive type); PFAM: Exonuclease; IMG reference gene:2508611143_SP. | TIGR02757 family protein; PFAM: Protein of unknown function (DUF2400); TIGRFAM: TIGR02757 family protein. | 0.556 |
| EJF06068.1 | EJF07693.1 | ThvES_00018710 | ThvES_00001680 | DNA polymerase III, alpha subunit (gram-positive type); PFAM: Exonuclease; IMG reference gene:2508611143_SP. | PFAM: Bacterial DNA polymerase III alpha subunit; PHP domain; TIGRFAM: DNA-directed DNA polymerase III (polc). | 0.935 |
| EJF06068.1 | metG | ThvES_00018710 | ThvES_00002890 | DNA polymerase III, alpha subunit (gram-positive type); PFAM: Exonuclease; IMG reference gene:2508611143_SP. | Protein containing C-terminal region/beta chain of methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.556 |
| EJF06355.1 | EJF06068.1 | ThvES_00015660 | ThvES_00018710 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. | DNA polymerase III, alpha subunit (gram-positive type); PFAM: Exonuclease; IMG reference gene:2508611143_SP. | 0.542 |
| EJF06355.1 | EJF06637.1 | ThvES_00015660 | ThvES_00012720 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. | PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb). | 0.635 |
| EJF06355.1 | EJF07172.1 | ThvES_00015660 | ThvES_00007330 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. | PFAM: DNA polymerase III, delta subunit. | 0.426 |
| EJF06355.1 | EJF07244.1 | ThvES_00015660 | ThvES_00006340 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. | PFAM: DNA polymerase III beta subunit, C-terminal domain; DNA polymerase III beta subunit, N-terminal domain; DNA polymerase III beta subunit, central domain; TIGRFAM: DNA polymerase III, beta subunit. | 0.457 |
| EJF06355.1 | EJF07609.1 | ThvES_00015660 | ThvES_00003210 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. | Hypothetical protein. | 0.615 |
| EJF06355.1 | EJF07693.1 | ThvES_00015660 | ThvES_00001680 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. | PFAM: Bacterial DNA polymerase III alpha subunit; PHP domain; TIGRFAM: DNA-directed DNA polymerase III (polc). | 0.561 |
| EJF06355.1 | metG | ThvES_00015660 | ThvES_00002890 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. | Protein containing C-terminal region/beta chain of methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.552 |
| EJF06637.1 | EJF06068.1 | ThvES_00012720 | ThvES_00018710 | PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb). | DNA polymerase III, alpha subunit (gram-positive type); PFAM: Exonuclease; IMG reference gene:2508611143_SP. | 0.490 |
| EJF06637.1 | EJF06355.1 | ThvES_00012720 | ThvES_00015660 | PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb). | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. | 0.635 |
| EJF06637.1 | EJF07244.1 | ThvES_00012720 | ThvES_00006340 | PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb). | PFAM: DNA polymerase III beta subunit, C-terminal domain; DNA polymerase III beta subunit, N-terminal domain; DNA polymerase III beta subunit, central domain; TIGRFAM: DNA polymerase III, beta subunit. | 0.642 |
| EJF06637.1 | EJF07609.1 | ThvES_00012720 | ThvES_00003210 | PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb). | Hypothetical protein. | 0.930 |
page 1 of 4