STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJF06989.1PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family. (198 aa)    
Predicted Functional Partners:
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
   
  
 0.850
EJF06903.1
Glycosyl transferase possibly involved in lipopolysaccharide synthesis; PFAM: Bacterial sugar transferase.
      0.811
EJF06988.1
Hypothetical protein.
       0.773
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
  
 
 0.750
EJF07073.1
Putative PLP-dependent enzyme possibly involved in cell wall biogenesis; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; Belongs to the DegT/DnrJ/EryC1 family.
 
     0.666
EJF06779.1
PFAM: Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
    
 0.551
EJF06990.1
Hypothetical protein.
       0.545
dapA
Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
  
  
 0.486
EJF06221.1
PFAM: Aminotransferase class I and II; IMG reference gene:2508610992_SP.
    
 0.461
EJF06090.1
PFAM: Aminotransferase class I and II.
    
 0.461
Your Current Organism:
Thiovulum sp. ES
NCBI taxonomy Id: 1177931
Other names: T. sp. ES
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.