STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJF06921.1DnaJ-class molecular chaperone with C-terminal Zn finger domain; PFAM: DnaJ domain. (280 aa)    
Predicted Functional Partners:
htpG
Molecular chaperone of HSP90 family; Molecular chaperone. Has ATPase activity.
  
 0.998
fusA
Translation elongation factor EF-G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF- [...]
  
 0.979
EJF07263.1
Hypothetical protein.
    
 0.962
EJF06519.1
Hypothetical protein.
    
 0.962
EJF06220.1
NAD-dependent protein deacetylase, SIR2 family; PFAM: Sir2 family.
   
  0.957
EJF07826.1
Putative transcriptional regulator; PFAM: MerR family regulatory protein.
  
 
 0.934
rplQ
PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17.
  
   0.916
EJF07837.1
Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
  
 
 0.915
rplM
Ribosomal protein L13, bacterial type; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.
  
   0.913
rplO
Ribosomal protein L15, bacterial/organelle; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.
   
   0.912
Your Current Organism:
Thiovulum sp. ES
NCBI taxonomy Id: 1177931
Other names: T. sp. ES
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