STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJF06078.1PFAM: N-6 DNA Methylase. (919 aa)    
Predicted Functional Partners:
EJF07398.1
Hypothetical protein.
  
  
 0.859
EJF07865.1
Putative RNA-binding protein, snRNP like protein; PFAM: Domain of unknown function (DUF814); Fibronectin-binding protein A N-terminus (FbpA).
  
  
 0.857
EJF06531.1
Hypothetical protein.
  
    0.732
EJF06079.1
PFAM: Helix-turn-helix.
       0.558
EJF06077.1
PFAM: Sodium:dicarboxylate symporter family; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
       0.553
EJF05910.1
Type I restriction-modification system methyltransferase subunit; PFAM: N-6 DNA Methylase.
 
    0.512
EJF06212.1
Type I restriction-modification system methyltransferase subunit; PFAM: Eco57I restriction endonuclease.
 
    0.506
EJF06228.1
Type I restriction-modification system methyltransferase subunit; PFAM: N-6 DNA Methylase.
 
    0.459
EJF07192.1
PFAM: Protein of unknown function DUF262; Protein of unknown function (DUF1524).
 
    0.434
EJF06253.1
PFAM: Protein of unknown function (DUF1524); Protein of unknown function DUF262.
 
    0.420
Your Current Organism:
Thiovulum sp. ES
NCBI taxonomy Id: 1177931
Other names: T. sp. ES
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.