STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF27080.1Tripartite-type tricarboxylate transporter, receptor component TctC. (332 aa)    
Predicted Functional Partners:
SFE56355.1
TctA family transporter.
 
  
 0.852
SFF11822.1
TctA family transporter.
 
  
 0.851
SFF23268.1
Putative tricarboxylic transport membrane protein.
 
  
 0.844
SFF27083.1
Kynurenine formamidase.
       0.625
SFE56379.1
Tripartite tricarboxylate transporter TctB family protein.
 
  
 0.584
SFF27071.1
DNA-binding transcriptional regulator, AcrR family.
       0.517
SFF27101.1
Fumarylacetoacetate (FAA) hydrolase.
       0.456
SFF23281.1
Putative tricarboxylic transport membrane protein.
  
  
 0.401
Your Current Organism:
Acidovorax wautersii
NCBI taxonomy Id: 1177982
Other names: A. wautersii, Acidovorax sp. NF1078, Acidovorax sp. NF1598, Acidovorax sp. NF1715, Acidovorax wautersii Vaneechoutte et al. 2013, CCUG 62584, DSM 27981, LMG 26971, LMG:26971
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.