STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI30758.1Heparinase II/III-like protein. (826 aa)    
Predicted Functional Partners:
SHI30742.1
Kelch motif-containing protein.
       0.732
SHI30773.1
Choline-sulfatase.
       0.709
SHI30789.1
Choline-sulfatase.
       0.699
SHI30806.1
Uncharacterized sulfatase.
       0.685
SHI30823.1
Arylsulfatase A.
       0.685
SHI30725.1
6-phosphogluconolactonase, cycloisomerase 2 family.
       0.607
SHI30840.1
Arylsulfatase A.
       0.538
SHI30858.1
Uncharacterized sulfatase.
       0.528
SHI30876.1
BNR repeat-containing family member.
    
  0.495
Your Current Organism:
Arenitalea lutea
NCBI taxonomy Id: 1178825
Other names: A. lutea, Arenitalea lutea Zhang et al. 2013, CGMCC 1.12213, Flavobacteriaceae bacterium P7-3-5, KACC 16457, strain P7-3-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.