STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI32076.1Starch-binding associating with outer membrane. (505 aa)    
Predicted Functional Partners:
SHI32096.1
TonB-linked outer membrane protein, SusC/RagA family.
 
     0.930
SHI32010.1
TonB-linked outer membrane protein, SusC/RagA family.
 
 
 
 0.884
SHI80728.1
TonB-linked outer membrane protein, SusC/RagA family.
 
 
   0.721
SHI32116.1
Two component regulator propeller.
 
   
 0.695
SHI31691.1
Por secretion system C-terminal sorting domain-containing protein.
 
     0.683
SHI31289.1
Cellulase (glycosyl hydrolase family 5); Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
 
  0.674
SHI31707.1
Glycosyl hydrolases family 2, sugar binding domain; Belongs to the glycosyl hydrolase 2 family.
 
 
   0.655
SHI32064.1
Glycosyl Hydrolase Family 88.
 
     0.634
SHI31951.1
Starch-binding associating with outer membrane.
 
     0.628
SHI31972.1
TonB-linked outer membrane protein, SusC/RagA family.
 
     0.624
Your Current Organism:
Arenitalea lutea
NCBI taxonomy Id: 1178825
Other names: A. lutea, Arenitalea lutea Zhang et al. 2013, CGMCC 1.12213, Flavobacteriaceae bacterium P7-3-5, KACC 16457, strain P7-3-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.