STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI32731.1Signal peptidase I; Belongs to the peptidase S26 family. (527 aa)    
Predicted Functional Partners:
SHJ09153.1
OstA-like protein.
  
     0.767
SHI32689.1
Hypothetical protein.
 
     0.716
SHI32774.1
WbqC-like protein family protein.
       0.699
SHI69011.1
Hypothetical protein.
  
   
 0.697
SHJ00264.1
Hypothetical protein.
 
   
 0.693
atpE
ATP synthase F0 subcomplex C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
    
 0.688
SHI32669.1
Chromosome partitioning protein, ParB family; Belongs to the ParB family.
     
 0.675
SHI32712.1
Dihydrodipicolinate reductase; Belongs to the DapB family.
  
    0.669
SHI32754.1
D-alanyl-D-alanine carboxypeptidase.
 
     0.668
SHI32649.1
Chromosome partitioning protein.
       0.664
Your Current Organism:
Arenitalea lutea
NCBI taxonomy Id: 1178825
Other names: A. lutea, Arenitalea lutea Zhang et al. 2013, CGMCC 1.12213, Flavobacteriaceae bacterium P7-3-5, KACC 16457, strain P7-3-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.