STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI39356.1LysE type translocator. (209 aa)    
Predicted Functional Partners:
SHI39340.1
methylated-DNA-protein-cysteine methyltransferase related protein.
       0.812
trmB
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
       0.811
SHI91026.1
Hypothetical protein.
  
     0.753
SHI49767.1
Hypothetical protein.
  
     0.713
SHI73753.1
Hypothetical protein.
  
     0.713
SHJ09716.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
 
 
   0.696
SHI49269.1
Putative MetA-pathway of phenol degradation.
  
     0.693
SHI86616.1
Family of unknown function.
  
     0.688
SHI39625.1
Protein of unknown function.
  
     0.641
SHI60935.1
Hypothetical protein.
  
     0.599
Your Current Organism:
Arenitalea lutea
NCBI taxonomy Id: 1178825
Other names: A. lutea, Arenitalea lutea Zhang et al. 2013, CGMCC 1.12213, Flavobacteriaceae bacterium P7-3-5, KACC 16457, strain P7-3-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.