STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI40295.1Trehalase. (434 aa)    
Predicted Functional Partners:
SHI40271.1
Transporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.900
SHI40317.1
Outer membrane receptor proteins, mostly Fe transport.
 
     0.892
SHI40251.1
Glycerate kinase; Belongs to the glycerate kinase type-1 family.
 
     0.687
SHI40338.1
Transcriptional regulator, LacI family.
 
     0.609
SHI84721.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.572
SHJ08817.1
Carboxypeptidase regulatory-like domain-containing protein.
  
     0.559
SHI40228.1
Mannose-6-phosphate isomerase, type 1.
       0.498
SHJ10640.1
Hypothetical protein.
  
    0.446
SHI37800.1
Por secretion system C-terminal sorting domain-containing protein; Belongs to the glycosyl hydrolase 13 family.
  
 
 0.410
Your Current Organism:
Arenitalea lutea
NCBI taxonomy Id: 1178825
Other names: A. lutea, Arenitalea lutea Zhang et al. 2013, CGMCC 1.12213, Flavobacteriaceae bacterium P7-3-5, KACC 16457, strain P7-3-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.