Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SHI36317.1 | SHI41119.1 | SAMN05216261_0447 | SAMN05216261_0672 | Peptidase family C25. | DNA-binding protein HU-beta; Belongs to the bacterial histone-like protein family. | 0.506 |
| SHI41072.1 | SHI41091.1 | SAMN05216261_0670 | SAMN05216261_0671 | Single-strand binding protein. | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.636 |
| SHI41072.1 | SHI41119.1 | SAMN05216261_0670 | SAMN05216261_0672 | Single-strand binding protein. | DNA-binding protein HU-beta; Belongs to the bacterial histone-like protein family. | 0.534 |
| SHI41091.1 | SHI41072.1 | SAMN05216261_0671 | SAMN05216261_0670 | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Single-strand binding protein. | 0.636 |
| SHI41091.1 | SHI41119.1 | SAMN05216261_0671 | SAMN05216261_0672 | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | DNA-binding protein HU-beta; Belongs to the bacterial histone-like protein family. | 0.625 |
| SHI41091.1 | SHI41141.1 | SAMN05216261_0671 | SAMN05216261_0673 | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Hypothetical protein. | 0.473 |
| SHI41119.1 | SHI36317.1 | SAMN05216261_0672 | SAMN05216261_0447 | DNA-binding protein HU-beta; Belongs to the bacterial histone-like protein family. | Peptidase family C25. | 0.506 |
| SHI41119.1 | SHI41072.1 | SAMN05216261_0672 | SAMN05216261_0670 | DNA-binding protein HU-beta; Belongs to the bacterial histone-like protein family. | Single-strand binding protein. | 0.534 |
| SHI41119.1 | SHI41091.1 | SAMN05216261_0672 | SAMN05216261_0671 | DNA-binding protein HU-beta; Belongs to the bacterial histone-like protein family. | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.625 |
| SHI41119.1 | SHI41141.1 | SAMN05216261_0672 | SAMN05216261_0673 | DNA-binding protein HU-beta; Belongs to the bacterial histone-like protein family. | Hypothetical protein. | 0.660 |
| SHI41119.1 | SHI41165.1 | SAMN05216261_0672 | SAMN05216261_0674 | DNA-binding protein HU-beta; Belongs to the bacterial histone-like protein family. | Ribonuclease G. | 0.509 |
| SHI41119.1 | SHJ09080.1 | SAMN05216261_0672 | SAMN05216261_2755 | DNA-binding protein HU-beta; Belongs to the bacterial histone-like protein family. | GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.465 |
| SHI41119.1 | dnaA | SAMN05216261_0672 | SAMN05216261_1861 | DNA-binding protein HU-beta; Belongs to the bacterial histone-like protein family. | Chromosomal replication initiator protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | 0.506 |
| SHI41119.1 | nusA | SAMN05216261_0672 | SAMN05216261_1774 | DNA-binding protein HU-beta; Belongs to the bacterial histone-like protein family. | NusA antitermination factor; Participates in both transcription termination and antitermination. | 0.475 |
| SHI41119.1 | rpsO | SAMN05216261_0672 | SAMN05216261_2644 | DNA-binding protein HU-beta; Belongs to the bacterial histone-like protein family. | SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.488 |
| SHI41119.1 | rpsT | SAMN05216261_0672 | SAMN05216261_2582 | DNA-binding protein HU-beta; Belongs to the bacterial histone-like protein family. | SSU ribosomal protein S20P; Binds directly to 16S ribosomal RNA. | 0.521 |
| SHI41141.1 | SHI41091.1 | SAMN05216261_0673 | SAMN05216261_0671 | Hypothetical protein. | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.473 |
| SHI41141.1 | SHI41119.1 | SAMN05216261_0673 | SAMN05216261_0672 | Hypothetical protein. | DNA-binding protein HU-beta; Belongs to the bacterial histone-like protein family. | 0.660 |
| SHI41141.1 | SHI41165.1 | SAMN05216261_0673 | SAMN05216261_0674 | Hypothetical protein. | Ribonuclease G. | 0.457 |
| SHI41141.1 | rpsO | SAMN05216261_0673 | SAMN05216261_2644 | Hypothetical protein. | SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.866 |
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