STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI49994.1Hypothetical protein. (411 aa)    
Predicted Functional Partners:
SHI50043.1
ATPase family associated with various cellular activities (AAA).
 
     0.948
SHI50074.1
Hypothetical protein.
 
     0.911
SHI50111.1
Hypothetical protein.
 
     0.846
SHI50017.1
Nudix-type nucleoside diphosphatase, YffH/AdpP family.
       0.773
SHJ00972.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.664
SHJ00955.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.648
SHI49924.1
Hypothetical protein.
       0.642
SHI49974.1
Hypothetical protein.
       0.639
SHI49945.1
Hypothetical protein.
       0.634
SHI30451.1
Putative auto-transporter adhesin, head GIN domain.
  
     0.630
Your Current Organism:
Arenitalea lutea
NCBI taxonomy Id: 1178825
Other names: A. lutea, Arenitalea lutea Zhang et al. 2013, CGMCC 1.12213, Flavobacteriaceae bacterium P7-3-5, KACC 16457, strain P7-3-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.