STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI51720.1Thiol:disulfide interchange protein DsbD. (148 aa)    
Predicted Functional Partners:
SHI55483.1
Hypothetical protein.
  
 
 0.750
SHI51695.1
Thiol:disulfide interchange protein DsbD.
 
    
0.718
SHI37506.1
Peptide-methionine (R)-S-oxide reductase.
    
 
 0.697
SHI55039.1
Peptide-methionine (R)-S-oxide reductase.
    
 
 0.697
SHJ14810.1
Thiol-disulfide isomerase or thioredoxin.
 
 
 0.651
SHI32774.1
WbqC-like protein family protein.
  
     0.647
SHI37400.1
Peptide-methionine (S)-S-oxide reductase.
    
 
 0.641
msrA
Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
    
 
 0.641
msrA-2
Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
    
 
 0.641
SHI81590.1
Protein of unknown function.
  
     0.613
Your Current Organism:
Arenitalea lutea
NCBI taxonomy Id: 1178825
Other names: A. lutea, Arenitalea lutea Zhang et al. 2013, CGMCC 1.12213, Flavobacteriaceae bacterium P7-3-5, KACC 16457, strain P7-3-5
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