Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHI48730.1 | SHI51801.1 | SAMN05216261_0757 | SAMN05216261_0888 | Acyl carrier protein. | Amino acid adenylation domain-containing protein. | 0.969 |
SHI48730.1 | SHI51946.1 | SAMN05216261_0757 | SAMN05216261_0894 | Acyl carrier protein. | Amino acid adenylation domain-containing protein. | 0.997 |
SHI48730.1 | SHI52016.1 | SAMN05216261_0757 | SAMN05216261_0897 | Acyl carrier protein. | Thioesterase domain-containing protein. | 0.645 |
SHI48730.1 | SHI73361.1 | SAMN05216261_0757 | SAMN05216261_1595 | Acyl carrier protein. | 3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.818 |
SHI48730.1 | SHI82525.1 | SAMN05216261_0757 | SAMN05216261_1880 | Acyl carrier protein. | Enoyl-[acyl-carrier-protein] reductase [NADH]. | 0.699 |
SHI48730.1 | SHI92119.1 | SAMN05216261_0757 | SAMN05216261_2173 | Acyl carrier protein. | [acyl-carrier-protein] S-malonyltransferase. | 0.898 |
SHI48730.1 | fabZ | SAMN05216261_0757 | SAMN05216261_2873 | Acyl carrier protein. | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily. | 0.825 |
SHI51801.1 | SHI48730.1 | SAMN05216261_0888 | SAMN05216261_0757 | Amino acid adenylation domain-containing protein. | Acyl carrier protein. | 0.969 |
SHI51801.1 | SHI51946.1 | SAMN05216261_0888 | SAMN05216261_0894 | Amino acid adenylation domain-containing protein. | Amino acid adenylation domain-containing protein. | 0.999 |
SHI51801.1 | SHI52016.1 | SAMN05216261_0888 | SAMN05216261_0897 | Amino acid adenylation domain-containing protein. | Thioesterase domain-containing protein. | 0.999 |
SHI51801.1 | SHI67925.1 | SAMN05216261_0888 | SAMN05216261_1350 | Amino acid adenylation domain-containing protein. | Acyl-[acyl-carrier-protein] desaturase. | 0.722 |
SHI51801.1 | SHI73361.1 | SAMN05216261_0888 | SAMN05216261_1595 | Amino acid adenylation domain-containing protein. | 3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.997 |
SHI51801.1 | SHI82525.1 | SAMN05216261_0888 | SAMN05216261_1880 | Amino acid adenylation domain-containing protein. | Enoyl-[acyl-carrier-protein] reductase [NADH]. | 0.933 |
SHI51801.1 | SHI92119.1 | SAMN05216261_0888 | SAMN05216261_2173 | Amino acid adenylation domain-containing protein. | [acyl-carrier-protein] S-malonyltransferase. | 0.998 |
SHI51801.1 | SHJ06946.1 | SAMN05216261_0888 | SAMN05216261_2698 | Amino acid adenylation domain-containing protein. | 3-oxoacyl-[acyl-carrier protein] reductase. | 0.783 |
SHI51801.1 | accA | SAMN05216261_0888 | SAMN05216261_2437 | Amino acid adenylation domain-containing protein. | acetyl-CoA carboxylase carboxyl transferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. | 0.704 |
SHI51801.1 | fabZ | SAMN05216261_0888 | SAMN05216261_2873 | Amino acid adenylation domain-containing protein. | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily. | 0.891 |
SHI51946.1 | SHI48730.1 | SAMN05216261_0894 | SAMN05216261_0757 | Amino acid adenylation domain-containing protein. | Acyl carrier protein. | 0.997 |
SHI51946.1 | SHI51801.1 | SAMN05216261_0894 | SAMN05216261_0888 | Amino acid adenylation domain-containing protein. | Amino acid adenylation domain-containing protein. | 0.999 |
SHI51946.1 | SHI52016.1 | SAMN05216261_0894 | SAMN05216261_0897 | Amino acid adenylation domain-containing protein. | Thioesterase domain-containing protein. | 0.999 |
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