STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI92345.1Electron transfer flavoprotein beta subunit. (248 aa)    
Predicted Functional Partners:
SHI92319.1
Electron transfer flavoprotein alpha subunit apoprotein.
 0.999
SHI29553.1
Acyl-CoA dehydrogenase.
 
 
 0.949
SHI36587.1
Acyl-CoA dehydrogenase.
 
 
 0.947
SHI51870.1
L-prolyl-[peptidyl carrier protein] dehydrogenase.
 
 
 0.943
SHJ16811.1
Acyl-CoA dehydrogenase.
 
 
 0.940
SHJ14229.1
long-chain-acyl-CoA dehydrogenase.
 
 
 0.937
SHI39068.1
glutaryl-CoA dehydrogenase.
 
 
 0.934
SHI87205.1
FAD/FMN-containing dehydrogenase.
  
 
 0.876
SHI29530.1
3-hydroxyacyl-CoA dehydrogenase.
 
 
 0.875
SHJ00457.1
Lycopene beta-cyclase.
  
 
 0.859
Your Current Organism:
Arenitalea lutea
NCBI taxonomy Id: 1178825
Other names: A. lutea, Arenitalea lutea Zhang et al. 2013, CGMCC 1.12213, Flavobacteriaceae bacterium P7-3-5, KACC 16457, strain P7-3-5
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