STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI94928.1Modulator of drug activity B. (193 aa)    
Predicted Functional Partners:
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
    
  0.867
SHI94947.1
Peroxiredoxin.
 
     0.835
SHI94967.1
Low temperature requirement protein LtrA.
 
     0.724
SHI94898.1
Transcriptional regulator, HxlR family.
 
   
 0.616
SHJ01371.1
NADPH-dependent FMN reductase.
    
 0.569
menA
1,4-dihydroxy-2-naphthoate prenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily.
    
  0.494
SHI57905.1
Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains.
    
  0.490
SHI39929.1
Methionine aminotransferase.
   
    0.479
SHI93855.1
Aspartate/methionine/tyrosine aminotransferase.
   
    0.479
SHJ05989.1
Aspartate aminotransferase.
   
    0.479
Your Current Organism:
Arenitalea lutea
NCBI taxonomy Id: 1178825
Other names: A. lutea, Arenitalea lutea Zhang et al. 2013, CGMCC 1.12213, Flavobacteriaceae bacterium P7-3-5, KACC 16457, strain P7-3-5
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